feat: add support for certificate configuration in npm and php modules, update repository URLs in configuration files

Signed-off-by: d9pouces <github@19pouces.net>

id_configurator/config.py

@@ -26,8 +26,31 @@ def _yes_no(value: bool) -> str:
     return "yes" if value else "no"
 
 
+def _fold_deb822_multiline(field: str, value: str) -> str:
+    """Render `field` as a DEB822 folded multi-line field (sources.list(5)):
+    each of `value`'s own lines indented by one space, with a truly blank
+    line represented as a lone `.` - exactly how an ASCII-armored GPG key
+    block is embedded directly in a `Signed-By` field, verified against a
+    real `apt-get update` run against a genuinely signed repository."""
+    folded = "\n".join(f" {line}" if line else " ." for line in value.splitlines())
+    return f"{field}:\n{folded}"
+
+
 class AptSource(BaseModel):
-    """A single APT source, in the DEB822 format (see sources.list(5))."""
+    """A single APT source, in the DEB822 format (see sources.list(5)).
+
+    Two ways to tell APT which key to trust this source with:
+    - `signed_by`: the ASCII-armored (.asc) *content* of a GPG public key,
+      folded inline as a multi-line `Signed-By` field - no separate keyring
+      file, no `gpg` binary needed to apply this configuration.
+    - `signed_by_file`: the *path* to a keyring already expected to exist on
+      the target system, written to the rendered `Signed-By` field verbatim.
+    If both are set, `signed_by` takes precedence.
+
+    `uri_to_replace`, if set, is an fnmatch pattern: this source is only
+    applied if it matches at least one URI already present in the machine's
+    existing apt configuration; otherwise it is skipped entirely.
+    """
 
     model_config = ConfigDict(populate_by_name=True)
 
@@ -42,6 +65,7 @@ class AptSource(BaseModel):
     enabled: bool = True
     trusted: bool | None = None
     signed_by: str | None = Field(default=None, alias="signed-by")
+    signed_by_file: str | None = Field(default=None, alias="signed-by-file")
     pdiffs: bool | None = None
     by_hash: bool | None = Field(default=None, alias="by-hash")
     allow_insecure: bool | None = Field(default=None, alias="allow-insecure")
@@ -55,67 +79,86 @@ class AptSource(BaseModel):
     check_date: bool | None = Field(default=None, alias="check-date")
     date_max_future: str | None = Field(default=None, alias="date-max-future")
     description: str | None = None
+    uri_to_replace: str | None = Field(default=None, alias="uri-to-replace")
 
-    def to_deb822(self) -> str:
-        """Render this source as a DEB822 stanza (as used in /etc/apt/sources.list.d/*.sources)."""
-        fields = [
-            ("Types", " ".join(self.types)),
-            ("URIs", " ".join(self.uris)),
-            ("Suites", " ".join(self.suites)),
+    def to_deb822(
+        self,
+        signed_by_armored_key: str | None = None,
+        signed_by_path: str | None = None,
+    ) -> str:
+        """Render this source as a DEB822 stanza (as used in
+        /etc/apt/sources.list.d/*.sources).
+
+        Neither `self.signed_by` nor `self.signed_by_file` is ever rendered
+        directly - the caller (the `apt` module) resolves which one applies
+        and passes the result in: `signed_by_armored_key` is folded inline
+        as a multi-line `Signed-By` field (see `_fold_deb822_multiline`);
+        `signed_by_path` is written as a plain single-line `Signed-By`
+        field. If both are given, `signed_by_armored_key` takes precedence.
+        """
+        lines = [
+            f"Types: {' '.join(self.types)}",
+            f"URIs: {' '.join(self.uris)}",
+            f"Suites: {' '.join(self.suites)}",
         ]
         if self.components:
-            fields.append(("Components", " ".join(self.components)))
+            lines.append(f"Components: {' '.join(self.components)}")
         if self.architectures:
-            fields.append(("Architectures", " ".join(self.architectures)))
+            lines.append(f"Architectures: {' '.join(self.architectures)}")
         if self.languages:
-            fields.append(("Languages", " ".join(self.languages)))
+            lines.append(f"Languages: {' '.join(self.languages)}")
         if self.targets:
-            fields.append(("Targets", " ".join(self.targets)))
-        if self.signed_by:
-            fields.append(("Signed-By", self.signed_by))
+            lines.append(f"Targets: {' '.join(self.targets)}")
+        if signed_by_armored_key:
+            lines.append(_fold_deb822_multiline("Signed-By", signed_by_armored_key))
+        elif signed_by_path:
+            lines.append(f"Signed-By: {signed_by_path}")
         if self.trusted is not None:
-            fields.append(("Trusted", _yes_no(self.trusted)))
+            lines.append(f"Trusted: {_yes_no(self.trusted)}")
         if self.pdiffs is not None:
-            fields.append(("PDiffs", _yes_no(self.pdiffs)))
+            lines.append(f"PDiffs: {_yes_no(self.pdiffs)}")
         if self.by_hash is not None:
-            fields.append(("By-Hash", _yes_no(self.by_hash)))
+            lines.append(f"By-Hash: {_yes_no(self.by_hash)}")
         if self.allow_insecure is not None:
-            fields.append(("Allow-Insecure", _yes_no(self.allow_insecure)))
+            lines.append(f"Allow-Insecure: {_yes_no(self.allow_insecure)}")
         if self.allow_weak is not None:
-            fields.append(("Allow-Weak", _yes_no(self.allow_weak)))
+            lines.append(f"Allow-Weak: {_yes_no(self.allow_weak)}")
         if self.allow_downgrade_to_insecure is not None:
-            fields.append(
-                (
-                    "Allow-Downgrade-To-Insecure",
-                    _yes_no(self.allow_downgrade_to_insecure),
-                )
+            lines.append(
+                f"Allow-Downgrade-To-Insecure: {_yes_no(self.allow_downgrade_to_insecure)}"
             )
         if self.check_valid_until is not None:
-            fields.append(("Check-Valid-Until", _yes_no(self.check_valid_until)))
+            lines.append(f"Check-Valid-Until: {_yes_no(self.check_valid_until)}")
         if self.valid_until_min:
-            fields.append(("Valid-Until-Min", self.valid_until_min))
+            lines.append(f"Valid-Until-Min: {self.valid_until_min}")
         if self.valid_until_max:
-            fields.append(("Valid-Until-Max", self.valid_until_max))
+            lines.append(f"Valid-Until-Max: {self.valid_until_max}")
         if self.check_date is not None:
-            fields.append(("Check-Date", _yes_no(self.check_date)))
+            lines.append(f"Check-Date: {_yes_no(self.check_date)}")
         if self.date_max_future:
-            fields.append(("Date-Max-Future", self.date_max_future))
+            lines.append(f"Date-Max-Future: {self.date_max_future}")
         if self.description:
-            fields.append(("Description", self.description))
-        fields.append(("Enabled", _yes_no(self.enabled)))
-        return "\n".join(f"{key}: {value}" for key, value in fields) + "\n"
+            lines.append(f"Description: {self.description}")
+        lines.append(f"Enabled: {_yes_no(self.enabled)}")
+        return "\n".join(lines) + "\n"
 
 
 class AptConfig(BaseModel):
     sources: list[AptSource] = Field(default_factory=list)
-    keys: list[NamedContent] = Field(default_factory=list)
 
 
 class ApkRepository(BaseModel):
-    """An Alpine APK repository (see /etc/apk/repositories), e.g. a URL ending in /main or /community."""
+    """An Alpine APK repository (see /etc/apk/repositories), e.g. a URL ending in /main or /community.
 
+    `url_to_replace`, if set, is an fnmatch pattern: this repository is only
+    applied if it matches at least one URL already present in the machine's
+    existing apk configuration; otherwise it is skipped entirely.
+    """
+
+    name: str
     url: str
     key: str | None = None
+    url_to_replace: str | None = None
 
 
 class ApkConfig(BaseModel):
@@ -123,10 +166,19 @@ class ApkConfig(BaseModel):
 
 
 class YumRepository(BaseModel):
+    """A YUM/DNF repository (see /etc/yum.repos.d/*.repo).
+
+    `index_url_to_replace`, if set, is an fnmatch pattern: this repository is
+    only applied if it matches at least one baseurl already present in the
+    machine's existing yum/dnf configuration; otherwise it is skipped
+    entirely.
+    """
+
     model_config = ConfigDict(populate_by_name=True)
     name: str
     index_url: str = Field(alias="index-url")
     gpg_url: str | None = Field(default=None, alias="gpg-url")
+    index_url_to_replace: str | None = Field(default=None, alias="index-url-to-replace")
 
 
 class YumConfig(BaseModel):

id_configurator/modules/apk.py

@@ -1,18 +1,27 @@
 """Detect existing APK (Alpine) repositories and configure new ones.
 
 If `<src>/etc/apk` exists, the existing `/etc/apk/repositories` file (if any)
-is copied into `<dst>` with every active line disabled (commented out), and
-the repositories declared in the configuration are appended as new, active
-lines. Public keys provided alongside a repository are written to
+is copied into `<dst>`, and the repositories declared in the configuration
+are appended as new, active lines. An existing active line is only disabled
+(commented out) if it matches the `url_to_replace` pattern of one of the
+configured repositories; lines matching no such pattern are copied through
+unchanged. Public keys provided alongside a repository are written to
 `<dst>/etc/apk/keys/`, named after their content so that repositories
 sharing the same key (a common case for official Alpine mirrors) only
 produce a single key file.
+
+A repository's `url_to_replace`, if set, is an fnmatch pattern checked
+against the URLs already active in /etc/apk/repositories: the repository
+is only written out if the pattern matches at least one of them, and
+skipped entirely otherwise.
 """
 
 from __future__ import annotations
 
+import fnmatch
 import hashlib
 import logging
+from collections.abc import Sequence
 from pathlib import Path
 
 from id_configurator.context import Context
@@ -25,11 +34,18 @@ _REPOSITORIES = "etc/apk/repositories"
 _KEYS_DIR = "etc/apk/keys"
 
 
-def _disable_repositories_content(content: str) -> str:
-    lines = [
-        line if not line.strip() or line.strip().startswith("#") else f"# {line}"
-        for line in content.splitlines()
-    ]
+def _disable_repositories_content(content: str, patterns: Sequence[str]) -> str:
+    lines = []
+    for line in content.splitlines():
+        stripped = line.strip()
+        if (
+            stripped
+            and not stripped.startswith("#")
+            and any(fnmatch.fnmatch(stripped, pattern) for pattern in patterns)
+        ):
+            lines.append(f"# {line}")
+        else:
+            lines.append(line)
     return "\n".join(lines) + "\n"
 
 
@@ -37,6 +53,19 @@ def _key_filename(content: bytes) -> str:
     return f"{hashlib.sha256(content).hexdigest()[:16]}.rsa.pub"
 
 
+def _existing_urls(context: Context) -> set[str]:
+    """Collect the URLs already declared in /etc/apk/repositories on the
+    source filesystem (one active, non-comment line per URL)."""
+    existing = context.read_src_file(_REPOSITORIES)
+    if existing is None:
+        return set()
+    return {
+        stripped
+        for line in existing.decode("utf-8").splitlines()
+        if (stripped := line.strip()) and not stripped.startswith("#")
+    }
+
+
 @register
 class ApkModule(Module):
     name = "apk"
@@ -52,26 +81,48 @@ class ApkModule(Module):
         return None
 
     def apply(self, context: Context) -> None:
-        disabled = self._disabled_existing_repositories(context)
+        patterns = [
+            repository.url_to_replace
+            for repository in context.config.configurations.apk.repositories
+            if repository.url_to_replace is not None
+        ]
+        disabled = self._disabled_existing_repositories(context, patterns)
         configured = self._configured_repositories_lines(context)
         content = disabled + ("\n".join(configured) + "\n" if configured else "")
         if content:
             context.write_file(_REPOSITORIES, content.encode("utf-8"))
 
     @staticmethod
-    def _disabled_existing_repositories(context: Context) -> str:
+    def _disabled_existing_repositories(
+        context: Context, patterns: Sequence[str]
+    ) -> str:
         existing = context.read_src_file(_REPOSITORIES)
         if existing is None:
             return ""
-        logger.info("disabled existing apk repositories %s", _REPOSITORIES)
-        return _disable_repositories_content(existing.decode("utf-8"))
+        logger.info("copied existing apk repositories %s", _REPOSITORIES)
+        return _disable_repositories_content(existing.decode("utf-8"), patterns)
 
     @staticmethod
     def _configured_repositories_lines(context: Context) -> list[str]:
         lines = []
+        existing_urls: set[str] | None = None
         for repository in context.config.configurations.apk.repositories:
+            if repository.url_to_replace is not None:
+                if existing_urls is None:
+                    existing_urls = _existing_urls(context)
+                if not any(
+                    fnmatch.fnmatch(url, repository.url_to_replace)
+                    for url in existing_urls
+                ):
+                    logger.info(
+                        "skipped apk repository %s: url-to-replace %s matched "
+                        "no existing url",
+                        repository.name,
+                        repository.url_to_replace,
+                    )
+                    continue
             lines.append(repository.url)
-            logger.info("added apk repository %s", repository.url)
+            logger.info("added apk repository %s", repository.name)
             if repository.key:
                 filename = _key_filename(repository.key.encode("utf-8"))
                 context.write_file(

id_configurator/modules/apt.py

@@ -2,45 +2,139 @@
 
 If `<src>/etc/apt` exists, any source file already present there (classic
 one-line `.list` files or DEB822 `.sources` files, whether at the top level
-or under `sources.list.d/`) is copied into `<dst>/etc/apt`, disabled so it no
-longer takes effect, and the sources declared in the configuration are added
-as new, enabled `.sources` files.
+or under `sources.list.d/`) is copied into `<dst>/etc/apt`, and the sources
+declared in the configuration are added as new, enabled `.sources` files.
+
+An existing entry (a single `deb`/`deb-src` line, or a DEB822 stanza) is only
+disabled if its URI matches the `uri_to_replace` pattern of one of the
+configured sources; entries matching no such pattern are copied through
+unchanged, still enabled.
+
+Each source can be trusted two ways: `signed_by` holds the ASCII-armored
+content of a GPG public key, folded inline as a multi-line `Signed-By`
+field (per sources.list(5) - verified empirically against a real,
+genuinely signed repository, so no `gpg` binary or separate keyring file
+is needed at all to apply this configuration). `signed_by_file` instead
+names a keyring already expected to exist on the target system, used
+verbatim as `Signed-By`; if both are given, `signed_by` takes precedence.
+
+A source's `uri_to_replace`, if set, is an fnmatch pattern checked against
+the URIs of the sources already present on the source filesystem: the
+source is only written out if the pattern matches at least one of them,
+and skipped entirely otherwise - even on an otherwise Debian-like machine.
 """
 
 from __future__ import annotations
 
+import fnmatch
 import logging
+from collections.abc import Sequence
 from pathlib import Path
 
 from id_configurator.context import Context
-from id_configurator.modules.base import Module, register
+from id_configurator.modules.base import Module, register, sanitize_filename
 
 logger = logging.getLogger(__name__)
 
 _APT_DIR = "etc/apt"
 _SOURCES_LIST = "etc/apt/sources.list"
 _SOURCES_LIST_D = "etc/apt/sources.list.d"
-_KEYRINGS_DIR = "etc/apt/keyrings"
 
 
-def _disable_list_content(content: str) -> str:
-    lines = [
-        line if not line.strip() or line.strip().startswith("#") else f"# {line}"
-        for line in content.splitlines()
-    ]
+def _uri_from_deb_line(stripped_line: str) -> str | None:
+    """Extract the URI from a single, already-stripped `deb`/`deb-src`
+    line (`deb [options] uri suite [component...]`), or `None` if the line
+    is not such a line."""
+    parts = stripped_line.split()
+    if not parts or parts[0] not in ("deb", "deb-src"):
+        return None
+    parts = parts[1:]
+    while parts and parts[0].startswith("["):
+        while parts and not parts[0].endswith("]"):
+            parts.pop(0)
+        if parts:
+            parts.pop(0)
+    return parts[0] if parts else None
+
+
+def _disable_list_content(content: str, patterns: Sequence[str]) -> str:
+    lines = []
+    for line in content.splitlines():
+        stripped = line.strip()
+        uri = (
+            None
+            if not stripped or stripped.startswith("#")
+            else _uri_from_deb_line(stripped)
+        )
+        if uri is not None and any(
+            fnmatch.fnmatch(uri, pattern) for pattern in patterns
+        ):
+            lines.append(f"# {line}")
+        else:
+            lines.append(line)
     return "\n".join(lines) + "\n"
 
 
-def _disable_deb822_content(content: str) -> str:
-    disabled_stanzas = []
+def _uris_from_deb822_stanza(stanza: str) -> set[str]:
+    uris: set[str] = set()
+    for line in stanza.splitlines():
+        if line.lower().startswith("uris:"):
+            uris.update(line.split(":", 1)[1].split())
+    return uris
+
+
+def _disable_deb822_content(content: str, patterns: Sequence[str]) -> str:
+    stanzas = []
     for stanza in content.split("\n\n"):
         if not stanza.strip():
             continue
         lines = stanza.splitlines()
-        new_lines = [line for line in lines if not line.lower().startswith("enabled:")]
-        new_lines.append("Enabled: no")
-        disabled_stanzas.append("\n".join(new_lines))
-    return "\n\n".join(disabled_stanzas) + "\n"
+        uris = _uris_from_deb822_stanza(stanza)
+        if any(fnmatch.fnmatch(uri, pattern) for uri in uris for pattern in patterns):
+            lines = [line for line in lines if not line.lower().startswith("enabled:")]
+            lines.append("Enabled: no")
+        stanzas.append("\n".join(lines))
+    return "\n\n".join(stanzas) + "\n"
+
+
+def _uris_from_list_content(content: str) -> set[str]:
+    """Extract the URIs declared in a classic one-line `.list` file
+    (`deb [options] uri suite [component...]`), skipping comments and any
+    bracketed option list."""
+    uris: set[str] = set()
+    for line in content.splitlines():
+        stripped = line.strip()
+        if not stripped or stripped.startswith("#"):
+            continue
+        uri = _uri_from_deb_line(stripped)
+        if uri is not None:
+            uris.add(uri)
+    return uris
+
+
+def _uris_from_deb822_content(content: str) -> set[str]:
+    """Extract the URIs declared in the `URIs:` field of each stanza of a
+    DEB822 `.sources` file."""
+    uris: set[str] = set()
+    for stanza in content.split("\n\n"):
+        uris.update(_uris_from_deb822_stanza(stanza))
+    return uris
+
+
+def _existing_uris(context: Context) -> set[str]:
+    """Collect every URI declared by the apt sources already present on the
+    source filesystem, whether in the top-level sources.list or under
+    sources.list.d/, in either the classic or the DEB822 format."""
+    uris: set[str] = set()
+    existing_top_level = context.read_src_file(_SOURCES_LIST)
+    if existing_top_level is not None:
+        uris.update(_uris_from_list_content(existing_top_level.decode("utf-8")))
+    for entry in context.iter_src_dir(_SOURCES_LIST_D):
+        if entry.suffix == ".sources":
+            uris.update(_uris_from_deb822_content(entry.read_text(encoding="utf-8")))
+        elif entry.suffix == ".list":
+            uris.update(_uris_from_list_content(entry.read_text(encoding="utf-8")))
+    return uris
 
 
 @register
@@ -58,43 +152,62 @@ class AptModule(Module):
         return None
 
     def apply(self, context: Context) -> None:
-        self._copy_existing_disabled(context)
-        self._write_configured_keys(context)
+        patterns = [
+            source.uri_to_replace
+            for source in context.config.configurations.apt.sources
+            if source.uri_to_replace is not None
+        ]
+        self._copy_existing_disabled(context, patterns)
         self._write_configured_sources(context)
 
     @staticmethod
-    def _copy_existing_disabled(context: Context) -> None:
+    def _copy_existing_disabled(context: Context, patterns: Sequence[str]) -> None:
         existing_top_level = context.read_src_file(_SOURCES_LIST)
         if existing_top_level is not None:
-            disabled = _disable_list_content(existing_top_level.decode("utf-8"))
+            disabled = _disable_list_content(
+                existing_top_level.decode("utf-8"), patterns
+            )
             context.write_file(_SOURCES_LIST, disabled.encode("utf-8"))
-            logger.info("disabled existing apt source list %s", _SOURCES_LIST)
+            logger.info("copied existing apt source list %s", _SOURCES_LIST)
 
         for entry in context.iter_src_dir(_SOURCES_LIST_D):
             if entry.suffix == ".sources":
-                disabled = _disable_deb822_content(entry.read_text(encoding="utf-8"))
+                disabled = _disable_deb822_content(
+                    entry.read_text(encoding="utf-8"), patterns
+                )
             elif entry.suffix == ".list":
-                disabled = _disable_list_content(entry.read_text(encoding="utf-8"))
+                disabled = _disable_list_content(
+                    entry.read_text(encoding="utf-8"), patterns
+                )
             else:
                 continue
             context.write_file(
                 f"{_SOURCES_LIST_D}/{entry.name}", disabled.encode("utf-8")
             )
-            logger.info("disabled existing apt source %s", entry.name)
-
-    @staticmethod
-    def _write_configured_keys(context: Context) -> None:
-        for key in context.config.configurations.apt.keys:
-            context.write_file(
-                f"{_KEYRINGS_DIR}/{key.name}.asc", key.content.encode("utf-8")
-            )
-            logger.info("installed apt keyring %s", key.name)
+            logger.info("copied existing apt source %s", entry.name)
 
     @staticmethod
     def _write_configured_sources(context: Context) -> None:
+        existing_uris: set[str] | None = None
         for source in context.config.configurations.apt.sources:
+            if source.uri_to_replace is not None:
+                if existing_uris is None:
+                    existing_uris = _existing_uris(context)
+                if not any(
+                    fnmatch.fnmatch(uri, source.uri_to_replace) for uri in existing_uris
+                ):
+                    logger.info(
+                        "skipped apt source %s: uri-to-replace %s matched no "
+                        "existing uri",
+                        source.name,
+                        source.uri_to_replace,
+                    )
+                    continue
             context.write_file(
-                f"{_SOURCES_LIST_D}/{source.name}.sources",
-                source.to_deb822().encode("utf-8"),
+                f"{_SOURCES_LIST_D}/{sanitize_filename(source.name)}.sources",
+                source.to_deb822(
+                    signed_by_armored_key=source.signed_by,
+                    signed_by_path=source.signed_by_file,
+                ).encode("utf-8"),
             )
             logger.info("added apt source %s", source.name)

id_configurator/modules/base.py

@@ -34,3 +34,18 @@ def register(module_cls: type[Module]) -> type[Module]:
 
 def all_modules() -> list[type[Module]]:
     return list(_REGISTRY)
+
+
+def sanitize_filename(name: str) -> str:
+    """Make a user-supplied name safe to use as a single filesystem path
+    component.
+
+    Modules that derive a file's name from configuration data (a
+    certificate's name, a repository's name, ...) must run it through this
+    first: without it, a name containing `/` (or `\\`, harmless on the
+    target systems this tool writes to but stripped for good measure)
+    would silently turn into extra, unintended path segments - creating
+    nested directories a careless or malicious name shouldn't be able to
+    create - instead of the single file the caller asked for.
+    """
+    return name.replace("/", "_").replace("\\", "_")

id_configurator/modules/certificates.py

@@ -49,7 +49,7 @@ import posixpath
 from pathlib import Path
 
 from id_configurator.context import Context
-from id_configurator.modules.base import Module, register
+from id_configurator.modules.base import Module, register, sanitize_filename
 
 logger = logging.getLogger(__name__)
 
@@ -142,7 +142,7 @@ class CertificatesModule(Module):
 
     def apply(self, context: Context) -> None:
         configured_names = {
-            certificate.name
+            sanitize_filename(certificate.name)
             for certificate in context.config.configurations.certificates
         }
         for existing in context.iter_src_dir(_LOCAL_CERTS_DIR):
@@ -152,7 +152,7 @@ class CertificatesModule(Module):
                 )
         for certificate in context.config.configurations.certificates:
             context.write_file(
-                f"{_LOCAL_CERTS_DIR}/{certificate.name}.crt",
+                f"{_LOCAL_CERTS_DIR}/{sanitize_filename(certificate.name)}.crt",
                 certificate.content.encode(),
             )
             logger.info("installed root certificate %s", certificate.name)
@@ -237,7 +237,7 @@ class CertificatesModule(Module):
                 )
         for certificate in context.config.configurations.certificates:
             context.write_file(
-                f"{_RHEL_ANCHORS_DIR}/{certificate.name}.crt",
+                f"{_RHEL_ANCHORS_DIR}/{sanitize_filename(certificate.name)}.crt",
                 certificate.content.encode(),
             )
 

id_configurator/modules/npm.py

@@ -15,6 +15,19 @@ separate, higher-precedence level in npm's own terminology. `$prefix`
 defaults to `/usr/local` for essentially every standard Node.js install
 (the official Docker image included); unlike a config dropped in one
 specific user's home, this applies regardless of which user invokes npm.
+
+`cafile` only covers npm's own registry client, though - it does nothing for
+Node itself, e.g. a package's install script or the application's own code
+making an HTTPS request. Node has no config file for that: the only way to
+extend its trust store is the `NODE_EXTRA_CA_CERTS` environment variable,
+read once at process startup. So whenever any certificate is configured -
+regardless of whether any npm repository is - it is also set system-wide in
+`/etc/environment` (merged with whatever is already there), which every
+login-based process (an SSH session, `su -`, ...) picks up via PAM's
+`pam_env`. This does not reach a `docker build`/`RUN` step or a container's
+own `ENTRYPOINT`/`CMD`, which never go through a login shell: propagating it
+there is the resulting image's own `Dockerfile`'s job (a plain `ENV`
+instruction), outside what a tool that only writes files can do.
 """
 
 from __future__ import annotations
@@ -29,6 +42,8 @@ logger = logging.getLogger(__name__)
 
 _NPMRC = "usr/local/etc/npmrc"
 _CA_BUNDLE = "/etc/ssl/certs/ca-certificates.crt"
+_ETC_ENVIRONMENT = "etc/environment"
+_NODE_EXTRA_CA_CERTS_VAR = "NODE_EXTRA_CA_CERTS"
 
 
 def _write_npmrc(context: Context, repositories: list[NpmRepository]) -> None:
@@ -41,12 +56,29 @@ def _write_npmrc(context: Context, repositories: list[NpmRepository]) -> None:
     logger.info("configured npm to use %s", repositories[0].url)
 
 
+def _update_etc_environment(context: Context) -> None:
+    existing = context.read_src_file(_ETC_ENVIRONMENT)
+    lines = [] if existing is None else existing.decode("utf-8").splitlines()
+    lines = [
+        line for line in lines if not line.startswith(f"{_NODE_EXTRA_CA_CERTS_VAR}=")
+    ]
+    lines.append(f"{_NODE_EXTRA_CA_CERTS_VAR}={_CA_BUNDLE}")
+    context.write_file(_ETC_ENVIRONMENT, ("\n".join(lines) + "\n").encode("utf-8"))
+    logger.info("configured %s in %s", _NODE_EXTRA_CA_CERTS_VAR, _ETC_ENVIRONMENT)
+
+
 @register
 class NpmModule(Module):
     name = "npm"
 
     def is_relevant(self, context: Context) -> bool:
-        return bool(context.config.configurations.npm.repositories)
+        return bool(context.config.configurations.npm.repositories) or bool(
+            context.config.configurations.certificates
+        )
 
     def apply(self, context: Context) -> None:
-        _write_npmrc(context, context.config.configurations.npm.repositories)
+        repositories = context.config.configurations.npm.repositories
+        if repositories:
+            _write_npmrc(context, repositories)
+        if context.config.configurations.certificates:
+            _update_etc_environment(context)

id_configurator/modules/php.py

@@ -14,6 +14,17 @@ Composer's own HTTPS client (PHP's stream wrapper, generally backed by
 curl) already trusts whatever the `certificates` module installs into the
 system CA store, so no per-repository certificate configuration is needed
 here, unlike Poetry's.
+
+Whenever any certificate is configured - regardless of whether any PHP
+repository is - `openssl.cafile` is also set, pointing at the same bundle,
+in a dedicated `conf.d` snippet: `usr/local/etc/php/conf.d/id-configurator-
+openssl.ini`, the directory the official PHP Docker images scan for extra
+`.ini` files (`docker-php-ext-enable`'s own mechanism), applied regardless
+of which SAPI (cli, fpm, apache) or php.ini is in use. This is normally
+inferred from OpenSSL's own compiled-in default CAfile (which the
+`certificates` module also rebuilds), but not every PHP build honors that
+default, so setting it explicitly makes every PHP script's own OpenSSL-based
+code (not just Composer's) reliably trust the configured certificates too.
 """
 
 from __future__ import annotations
@@ -28,6 +39,8 @@ from id_configurator.modules.base import Module, register
 logger = logging.getLogger(__name__)
 
 _COMPOSER_CONFIG = "root/.composer/config.json"
+_CA_BUNDLE = "/etc/ssl/certs/ca-certificates.crt"
+_OPENSSL_INI = "usr/local/etc/php/conf.d/id-configurator-openssl.ini"
 
 
 def _write_composer_config(context: Context, repositories: list[PhpRepository]) -> None:
@@ -45,12 +58,23 @@ def _write_composer_config(context: Context, repositories: list[PhpRepository])
     )
 
 
+def _write_openssl_ini(context: Context) -> None:
+    context.write_file(_OPENSSL_INI, f"openssl.cafile={_CA_BUNDLE}\n".encode())
+    logger.info("configured openssl.cafile to use %s", _CA_BUNDLE)
+
+
 @register
 class PhpModule(Module):
     name = "php"
 
     def is_relevant(self, context: Context) -> bool:
-        return bool(context.config.configurations.php.repositories)
+        return bool(context.config.configurations.php.repositories) or bool(
+            context.config.configurations.certificates
+        )
 
     def apply(self, context: Context) -> None:
-        _write_composer_config(context, context.config.configurations.php.repositories)
+        repositories = context.config.configurations.php.repositories
+        if repositories:
+            _write_composer_config(context, repositories)
+        if context.config.configurations.certificates:
+            _write_openssl_ini(context)

id_configurator/modules/yum.py

@@ -4,10 +4,13 @@ DNF is a drop-in successor to YUM and reads the exact same `.repo` files
 under `/etc/yum.repos.d/`, so a single module covers both.
 
 If `<src>/etc/yum.repos.d` exists, every `.repo` file already there is
-copied into `<dst>` with all of its sections disabled (`enabled=0`), before
-the repositories declared in the configuration are written as new, enabled
-`.repo` files (so a configured repository reusing an existing file name
-ends up enabled, taking precedence over the disabled copy). Each `.repo`
+copied into `<dst>`, before the repositories declared in the configuration
+are written as new, enabled `.repo` files (so a configured repository
+reusing an existing file name ends up enabled, taking precedence over the
+copied one). A section of an existing `.repo` file is only disabled
+(`enabled=0`) if its `baseurl`/`mirrorlist` matches the
+`index_url_to_replace` pattern of one of the configured repositories;
+sections matching no such pattern are copied through unchanged. Each `.repo`
 file is written referencing its `gpg-url` (used verbatim as `gpgkey=`,
 exactly as YUM/DNF expect: `https://`, or a `file://` path already present
 on the target system). Separately, each GPG key declared in
@@ -17,20 +20,27 @@ conventional location such keys live at on RPM-based systems. `gpg` is only
 used here to validate the key; the actual trust decision is left to
 YUM/DNF, which import it from that file the first time the repository is
 used (as `rpm --import` would).
+
+A repository's `index_url_to_replace`, if set, is an fnmatch pattern
+checked against the baseurl of every section of every existing `.repo`
+file: the repository is only written out if the pattern matches at least
+one of them, and skipped entirely otherwise.
 """
 
 from __future__ import annotations
 
 import configparser
+import fnmatch
 import logging
 import shutil
 import subprocess
 import tempfile
+from collections.abc import Sequence
 from io import StringIO
 
 from id_configurator.config import NamedContent, YumRepository
 from id_configurator.context import Context
-from id_configurator.modules.base import Module, register
+from id_configurator.modules.base import Module, register, sanitize_filename
 
 logger = logging.getLogger(__name__)
 
@@ -38,24 +48,46 @@ _REPOS_DIR = "etc/yum.repos.d"
 _RPM_GPG_DIR = "etc/pki/rpm-gpg"
 
 
-def _disable_repo_content(content: str) -> str:
+def _disable_repo_content(content: str, patterns: Sequence[str]) -> str:
     parser = configparser.ConfigParser(interpolation=None)
     parser.optionxform = str
     parser.read_string(content)
     for section in parser.sections():
-        parser[section]["enabled"] = "0"
+        urls = [parser[section].get(key) for key in ("baseurl", "mirrorlist")]
+        urls = [url for url in urls if url]
+        if any(fnmatch.fnmatch(url, pattern) for url in urls for pattern in patterns):
+            parser[section]["enabled"] = "0"
     buffer = StringIO()
     parser.write(buffer, space_around_delimiters=False)
     return buffer.getvalue()
 
 
-def _disable_existing_repos(context: Context) -> None:
+def _existing_index_urls(context: Context) -> set[str]:
+    """Collect the baseurl of every section of every .repo file already
+    present on the source filesystem."""
+    urls: set[str] = set()
     for entry in context.iter_src_dir(_REPOS_DIR):
         if entry.suffix != ".repo":
             continue
-        disabled = _disable_repo_content(entry.read_text(encoding="utf-8"))
+        parser = configparser.ConfigParser(interpolation=None)
+        parser.optionxform = str
+        parser.read_string(entry.read_text(encoding="utf-8"))
+        for section in parser.sections():
+            # noinspection SpellCheckingInspection
+            for key in ("baseurl", "mirrorlist"):
+                url = parser[section].get(key)
+                if url:
+                    urls.add(url)
+    return urls
+
+
+def _disable_existing_repos(context: Context, patterns: Sequence[str]) -> None:
+    for entry in context.iter_src_dir(_REPOS_DIR):
+        if entry.suffix != ".repo":
+            continue
+        disabled = _disable_repo_content(entry.read_text(encoding="utf-8"), patterns)
         context.write_file(f"{_REPOS_DIR}/{entry.name}", disabled.encode("utf-8"))
-        logger.info("disabled existing yum/dnf repository file %s", entry.name)
+        logger.info("copied existing yum/dnf repository file %s", entry.name)
 
 
 def _write_repo_file(context: Context, repository: YumRepository) -> None:
@@ -71,7 +103,7 @@ def _write_repo_file(context: Context, repository: YumRepository) -> None:
     else:
         lines.append("gpgcheck=0")
     context.write_file(
-        f"{_REPOS_DIR}/{repository.name}.repo",
+        f"{_REPOS_DIR}/{sanitize_filename(repository.name)}.repo",
         ("\n".join(lines) + "\n").encode("utf-8"),
     )
     logger.info("added yum/dnf repository %s", repository.name)
@@ -100,7 +132,8 @@ def _validate_gpg_key(name: str, content: bytes) -> None:
 def _import_key(context: Context, key: NamedContent) -> None:
     _validate_gpg_key(key.name, key.content.encode("utf-8"))
     context.write_file(
-        f"{_RPM_GPG_DIR}/RPM-GPG-KEY-{key.name}", key.content.encode("utf-8")
+        f"{_RPM_GPG_DIR}/RPM-GPG-KEY-{sanitize_filename(key.name)}",
+        key.content.encode("utf-8"),
     )
     logger.info("imported yum/dnf GPG key %s", key.name)
 
@@ -119,8 +152,28 @@ class YumModule(Module):
         return bool(yum.repositories) or bool(yum.keys) or any(existing_repo_files)
 
     def apply(self, context: Context) -> None:
-        _disable_existing_repos(context)
+        patterns = [
+            repository.index_url_to_replace
+            for repository in context.config.configurations.yum.repositories
+            if repository.index_url_to_replace is not None
+        ]
+        _disable_existing_repos(context, patterns)
+        existing_index_urls: set[str] | None = None
         for repository in context.config.configurations.yum.repositories:
+            if repository.index_url_to_replace is not None:
+                if existing_index_urls is None:
+                    existing_index_urls: set[str] = _existing_index_urls(context)
+                if not any(
+                    fnmatch.fnmatch(url, repository.index_url_to_replace)
+                    for url in existing_index_urls
+                ):
+                    logger.info(
+                        "skipped yum/dnf repository %s: index-url-to-replace %s "
+                        "matched no existing baseurl",
+                        repository.name,
+                        repository.index_url_to_replace,
+                    )
+                    continue
             _write_repo_file(context, repository)
         for key in context.config.configurations.yum.keys:
             _import_key(context, key)

library/id_configurator.py

@@ -123,7 +123,17 @@ options:
             description: DEB822 "Trusted" field.
           signed_by:
             type: str
-            description: DEB822 "Signed-By" field.
+            description:
+              - ASCII-armored content of a GPG public key to trust this
+                source with. Folded inline as a multi-line Signed-By field
+                (no separate keyring file or gpg binary needed). Takes
+                precedence over signed_by_file if both are set.
+          signed_by_file:
+            type: str
+            description:
+              - Path to a keyring already expected to exist on the target
+                system, used verbatim as the rendered Signed-By field.
+                Ignored if signed_by is also set.
           pdiffs:
             type: bool
             description: DEB822 "PDiffs" field.
@@ -157,20 +167,13 @@ options:
           description:
             type: str
             description: DEB822 "Description" field.
-      keys:
-        type: list
-        elements: dict
-        default: []
-        description: GPG keys trusted for the sources above (NamedContent).
-        suboptions:
-          name:
+          uri_to_replace:
             type: str
-            required: true
-            description: A short, unique name for this entry.
-          content:
-            type: str
-            required: true
-            description: PEM-encoded/ASCII-armored key content.
+            description:
+              - fnmatch pattern checked against the URIs already present in
+                the machine's existing apt configuration. If set, this
+                source is only applied when the pattern matches at least
+                one of them; otherwise it is skipped entirely.
   apk:
     type: dict
     default: {}
@@ -189,6 +192,13 @@ options:
           key:
             type: str
             description: The signing key's name, if any (see NamedContent).
+          url_to_replace:
+            type: str
+            description:
+              - fnmatch pattern checked against the URLs already active in
+                the machine's existing /etc/apk/repositories. If set, this
+                repository is only applied when the pattern matches at
+                least one of them; otherwise it is skipped entirely.
   yum:
     type: dict
     default: {}
@@ -211,6 +221,13 @@ options:
           gpg_url:
             type: str
             description: The repository's gpgkey URL.
+          index_url_to_replace:
+            type: str
+            description:
+              - fnmatch pattern checked against the baseurl of every
+                section of every existing .repo file. If set, this
+                repository is only applied when the pattern matches at
+                least one of them; otherwise it is skipped entirely.
       keys:
         type: list
         elements: dict
@@ -483,6 +500,7 @@ ARGUMENT_SPEC = {
                     "enabled": {"type": "bool", "default": True},
                     "trusted": {"type": "bool"},
                     "signed_by": {"type": "str"},
+                    "signed_by_file": {"type": "str"},
                     "pdiffs": {"type": "bool"},
                     "by_hash": {"type": "bool"},
                     "allow_insecure": {"type": "bool"},
@@ -494,14 +512,9 @@ ARGUMENT_SPEC = {
                     "check_date": {"type": "bool"},
                     "date_max_future": {"type": "str"},
                     "description": {"type": "str"},
+                    "uri_to_replace": {"type": "str"},
                 },
             },
-            "keys": {
-                "type": "list",
-                "elements": "dict",
-                "default": [],
-                "options": dict(_NAMED_CONTENT_OPTIONS),
-            },
         },
     },
     "apk": {
@@ -515,6 +528,7 @@ ARGUMENT_SPEC = {
                 "options": {
                     "url": {"type": "str", "required": True},
                     "key": {"type": "str"},
+                    "url_to_replace": {"type": "str"},
                 },
             },
         },
@@ -531,6 +545,7 @@ ARGUMENT_SPEC = {
                     "name": {"type": "str", "required": True},
                     "index_url": {"type": "str", "required": True},
                     "gpg_url": {"type": "str"},
+                    "index_url_to_replace": {"type": "str"},
                 },
             },
             "keys": {

pyproject.toml

@@ -45,7 +45,7 @@ maintainers = [
 name = "id-configurator"
 readme = "README.md"
 requires-python = ">=3.13"
-version = "0.2.0"
+version = "2026.9.7"
 
 [project.scripts]
 id-configurator = "id_configurator:main"

tests/configs/Apk.yaml.j2

@@ -8,10 +8,11 @@ configurations:
 {{ 'certs/test-ca.crt.pem' | file | indent(6, first=true) }}
   apt:
     sources: []
-    keys: []
   apk:
     repositories:
-    - url: https://host.docker.internal:{{ 'APK_REPO_PORT' | env }}/
+    - name: demo
+      url: https://host.docker.internal:{{ 'APK_REPO_PORT' | env }}/
+      url_to_replace: https://dl-cdn.alpinelinux.org/*
       key: |
 {{ 'dockerfiles/repos/040d0af5f97a0a44.rsa.pub' | file | indent(8, first=true) }}
   yum:

tests/configs/Apt.yaml.j2

@@ -13,8 +13,9 @@ configurations:
       uris:
       - https://host.docker.internal:{{ 'APT_REPO_PORT' | env }}/
       suites: ["./"]
-      trusted: true
-    keys: []
+      uri-to-replace: http://deb.debian.org/*
+      signed-by: |
+{{ 'dockerfiles/repos/apt-signing-key.pub.asc' | file | indent(8, first=true) }}
   apk:
     repositories: []
   yum:

tests/configs/Certificate.yaml.j2

@@ -8,7 +8,6 @@ configurations:
 {{ 'certs/test-ca.crt.pem' | file | indent(6, first=true) }}
   apt:
     sources: []
-    keys: []
   apk:
     repositories: []
   yum:

tests/configs/Go.yaml.j2

@@ -8,7 +8,6 @@ configurations:
 {{ 'certs/test-ca.crt.pem' | file | indent(6, first=true) }}
   apt:
     sources: []
-    keys: []
   apk:
     repositories: []
   yum:

tests/configs/Java.yaml.j2

@@ -8,7 +8,6 @@ configurations:
 {{ 'certs/test-ca.crt.pem' | file | indent(6, first=true) }}
   apt:
     sources: []
-    keys: []
   apk:
     repositories: []
   yum:

tests/configs/Npm.yaml.j2

@@ -8,7 +8,6 @@ configurations:
 {{ 'certs/test-ca.crt.pem' | file | indent(6, first=true) }}
   apt:
     sources: []
-    keys: []
   apk:
     repositories: []
   yum:

tests/configs/NuGet.yaml.j2

@@ -8,7 +8,6 @@ configurations:
 {{ 'certs/test-ca.crt.pem' | file | indent(6, first=true) }}
   apt:
     sources: []
-    keys: []
   apk:
     repositories: []
   yum:

tests/configs/Php.yaml.j2

@@ -8,7 +8,6 @@ configurations:
 {{ 'certs/test-ca.crt.pem' | file | indent(6, first=true) }}
   apt:
     sources: []
-    keys: []
   apk:
     repositories: []
   yum:

tests/configs/Python.yaml.j2

@@ -8,7 +8,6 @@ configurations:
 {{ 'certs/test-ca.crt.pem' | file | indent(6, first=true) }}
   apt:
     sources: []
-    keys: []
   apk:
     repositories: []
   yum:

tests/configs/Ruby.yaml.j2

@@ -8,7 +8,6 @@ configurations:
 {{ 'certs/test-ca.crt.pem' | file | indent(6, first=true) }}
   apt:
     sources: []
-    keys: []
   apk:
     repositories: []
   yum:

tests/configs/Rust.yaml.j2

@@ -8,7 +8,6 @@ configurations:
 {{ 'certs/test-ca.crt.pem' | file | indent(6, first=true) }}
   apt:
     sources: []
-    keys: []
   apk:
     repositories: []
   yum:

tests/configs/Yum.yaml.j2

@@ -8,13 +8,13 @@ configurations:
 {{ 'certs/test-ca.crt.pem' | file | indent(6, first=true) }}
   apt:
     sources: []
-    keys: []
   apk:
     repositories: []
   yum:
     repositories:
     - name: demo
       index-url: https://host.docker.internal:{{ 'YUM_REPO_PORT' | env }}/
+      index-url-to-replace: https://mirrors.rockylinux.org/*
     keys: []
   python:
     repositories: []

tests/dockerfiles/repos/apt-repo.Dockerfile

@@ -1,12 +1,18 @@
 # Minimal flat-format APT repository serving one hand-built .deb package over
 # TLS, used by tox-docker to exercise the `apt` module integration test
-# (tests/configs/Apt.yaml.tmpl, tests/dockerfiles/Apt.Dockerfile).
+# (tests/configs/Apt.yaml.j2, tests/dockerfiles/Apt.Dockerfile). Its
+# InRelease file is genuinely signed with the dedicated key pair
+# apt-signing-key.key.asc / apt-signing-key.pub.asc, whose public half is
+# what tests/configs/Apt.yaml.j2 embeds as the configured source's
+# `signed-by`: the `apt` module dearmors it into a keyring, and APT itself
+# verifies the InRelease signature against that keyring on `apt-get update`
+# - no `Trusted: yes` bypass involved.
 #
 # Built by tox-docker, whose build context is this directory (not the repo
 # root) - every COPY source below must live under tests/dockerfiles/repos/.
 FROM debian:trixie-slim AS packagebuild
 RUN apt-get update \
-    && apt-get install -y --no-install-recommends dpkg-dev \
+    && apt-get install -y --no-install-recommends dpkg-dev apt-utils gnupg \
     && rm -rf /var/lib/apt/lists/*
 RUN set -eux; \
     pkg=idconfiguratortestpkg; \
@@ -18,6 +24,13 @@ RUN set -eux; \
 WORKDIR /srv
 RUN dpkg-scanpackages --multiversion . > Packages \
     && gzip -9c Packages > Packages.gz
+COPY apt-signing-key.key.asc /tmp/apt-signing-key.key.asc
+RUN gnupg_home="$(mktemp -d)" \
+    && gpg --homedir "$gnupg_home" --batch --import /tmp/apt-signing-key.key.asc \
+    && key_id="$(gpg --homedir "$gnupg_home" --list-secret-keys --with-colons | awk -F: '/^sec/{print $5; exit}')" \
+    && apt-ftparchive release . > Release \
+    && gpg --homedir "$gnupg_home" --batch --yes --pinentry-mode loopback --default-key "$key_id" --clearsign -o InRelease Release \
+    && rm -rf "$gnupg_home" /tmp/apt-signing-key.key.asc
 
 FROM nginx:alpine
 COPY --from=packagebuild /srv /srv

tests/dockerfiles/repos/apt-signing-key.key.asc

@@ -0,0 +1,33 @@
+-----BEGIN PGP PRIVATE KEY BLOCK-----
+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+=TrE4
+-----END PGP PRIVATE KEY BLOCK-----

tests/dockerfiles/repos/apt-signing-key.pub.asc

@@ -0,0 +1,19 @@
+-----BEGIN PGP PUBLIC KEY BLOCK-----
+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+=qZrp
+-----END PGP PUBLIC KEY BLOCK-----

tests/test_apk.py

@@ -14,10 +14,11 @@ CONFIG_DATA = {
         "apk": {
             "repositories": [
                 {
+                    "name": "main",
                     "url": "https://example.invalid/v3.19/main",
                     "key": KEY_BYTES,
                 },
-                {"url": "https://example.invalid/v3.19/community"},
+                {"name": "community", "url": "https://example.invalid/v3.19/community"},
             ]
         }
     },
@@ -47,7 +48,9 @@ def test_is_relevant_true_with_apk_dir(tmp_path) -> None:
     assert ApkModule().is_relevant(context) is True
 
 
-def test_apply_disables_existing_and_adds_configured_repositories(tmp_path) -> None:
+def test_apply_copies_existing_repositories_unchanged_without_url_to_replace(
+    tmp_path,
+) -> None:
     src = tmp_path / "src"
     apk_dir = src / "etc/apk"
     apk_dir.mkdir(parents=True)
@@ -61,11 +64,13 @@ def test_apply_disables_existing_and_adds_configured_repositories(tmp_path) -> N
 
     ApkModule().apply(context)
 
+    # No configured repository declares a url_to_replace, so the existing
+    # lines are copied through unchanged, still active.
     content = (dst / "etc/apk/repositories").read_text(encoding="utf-8")
     assert content == (
         "# comment\n"
-        "# https://old-mirror.invalid/v3.18/main\n"
-        "# https://old-mirror.invalid/v3.18/community\n"
+        "https://old-mirror.invalid/v3.18/main\n"
+        "https://old-mirror.invalid/v3.18/community\n"
         "https://example.invalid/v3.19/main\n"
         "https://example.invalid/v3.19/community\n"
     )
@@ -74,6 +79,42 @@ def test_apply_disables_existing_and_adds_configured_repositories(tmp_path) -> N
     assert key_content == KEY_BYTES
 
 
+def test_apply_disables_only_existing_lines_matching_url_to_replace(tmp_path) -> None:
+    src = tmp_path / "src"
+    apk_dir = src / "etc/apk"
+    apk_dir.mkdir(parents=True)
+    (apk_dir / "repositories").write_text(
+        "https://old-mirror.invalid/v3.18/main\nhttps://old-mirror.invalid/v3.18/community\n",
+        encoding="utf-8",
+    )
+    data = {
+        "uuid": "12345678-1234-5678-1234-567812345678",
+        "organisation": "InterDiode",
+        "configurations": {
+            "apk": {
+                "repositories": [
+                    {
+                        "name": "main",
+                        "url": "https://example.invalid/v3.19/main",
+                        "url_to_replace": "https://old-mirror.invalid/v3.18/main",
+                    }
+                ]
+            }
+        },
+    }
+    dst = tmp_path / "dst"
+    context = Context(config=Configuration.model_validate(data), dst=dst, src=src)
+
+    ApkModule().apply(context)
+
+    content = (dst / "etc/apk/repositories").read_text(encoding="utf-8")
+    assert content == (
+        "# https://old-mirror.invalid/v3.18/main\n"
+        "https://old-mirror.invalid/v3.18/community\n"
+        "https://example.invalid/v3.19/main\n"
+    )
+
+
 def test_apply_without_existing_repositories_file(tmp_path) -> None:
     src = tmp_path / "src"
     (src / "etc/apk").mkdir(parents=True)
@@ -89,6 +130,99 @@ def test_apply_without_existing_repositories_file(tmp_path) -> None:
     )
 
 
+def test_apply_skips_repository_when_url_to_replace_matches_nothing(tmp_path) -> None:
+    src = tmp_path / "src"
+    apk_dir = src / "etc/apk"
+    apk_dir.mkdir(parents=True)
+    (apk_dir / "repositories").write_text(
+        "https://old-mirror.invalid/v3.18/main\n", encoding="utf-8"
+    )
+    data = {
+        "uuid": "12345678-1234-5678-1234-567812345678",
+        "organisation": "InterDiode",
+        "configurations": {
+            "apk": {
+                "repositories": [
+                    {
+                        "name": "main",
+                        "url": "https://example.invalid/v3.19/main",
+                        "url_to_replace": "https://other.invalid/*",
+                    }
+                ]
+            }
+        },
+    }
+    dst = tmp_path / "dst"
+    context = Context(config=Configuration.model_validate(data), dst=dst, src=src)
+
+    ApkModule().apply(context)
+
+    content = (dst / "etc/apk/repositories").read_text(encoding="utf-8")
+    assert "example.invalid" not in content
+
+
+def test_apply_writes_repository_when_url_to_replace_matches_existing(tmp_path) -> None:
+    src = tmp_path / "src"
+    apk_dir = src / "etc/apk"
+    apk_dir.mkdir(parents=True)
+    (apk_dir / "repositories").write_text(
+        "https://old-mirror.invalid/v3.18/main\n", encoding="utf-8"
+    )
+    data = {
+        "uuid": "12345678-1234-5678-1234-567812345678",
+        "organisation": "InterDiode",
+        "configurations": {
+            "apk": {
+                "repositories": [
+                    {
+                        "name": "main",
+                        "url": "https://example.invalid/v3.19/main",
+                        "url_to_replace": "https://old-mirror.invalid/*",
+                    }
+                ]
+            }
+        },
+    }
+    dst = tmp_path / "dst"
+    context = Context(config=Configuration.model_validate(data), dst=dst, src=src)
+
+    ApkModule().apply(context)
+
+    content = (dst / "etc/apk/repositories").read_text(encoding="utf-8")
+    assert "https://example.invalid/v3.19/main" in content
+
+
+def test_apply_reuses_cached_existing_urls_and_handles_missing_file(tmp_path) -> None:
+    src = tmp_path / "src"
+    (src / "etc/apk").mkdir(parents=True)
+    data = {
+        "uuid": "12345678-1234-5678-1234-567812345678",
+        "organisation": "InterDiode",
+        "configurations": {
+            "apk": {
+                "repositories": [
+                    {
+                        "name": "main",
+                        "url": "https://example.invalid/v3.19/main",
+                        "url_to_replace": "https://old.invalid/*",
+                    },
+                    {
+                        "name": "community",
+                        "url": "https://example.invalid/v3.19/community",
+                        "url_to_replace": "https://old.invalid/*",
+                    },
+                ]
+            }
+        },
+    }
+    dst = tmp_path / "dst"
+    context = Context(config=Configuration.model_validate(data), dst=dst, src=src)
+
+    ApkModule().apply(context)
+
+    assert not (dst / "etc/apk/repositories").exists()
+
+
 def test_apply_writes_nothing_when_no_repositories_at_all(tmp_path) -> None:
     empty_config = Configuration.model_validate(
         {"uuid": "12345678-1234-5678-1234-567812345678", "organisation": "InterDiode"}

tests/test_apt.py

@@ -2,6 +2,13 @@ from id_configurator.config import Configuration
 from id_configurator.context import Context
 from id_configurator.modules.apt import AptModule
 
+KEY_CONTENT = (
+    "-----BEGIN PGP PUBLIC KEY BLOCK-----\n"
+    "\n"
+    "mQENBGqh08IBCAC0\n"
+    "-----END PGP PUBLIC KEY BLOCK-----\n"
+)
+
 SOURCE_CONTENT = {
     "uuid": "12345678-1234-5678-1234-567812345678",
     "organisation": "InterDiode",
@@ -12,13 +19,7 @@ SOURCE_CONTENT = {
                     "name": "interdiode",
                     "uris": ["http://example.invalid/debian"],
                     "suites": ["stable"],
-                    "signed-by": "/etc/apt/keyrings/interdiode.asc",
-                }
-            ],
-            "keys": [
-                {
-                    "name": "interdiode",
-                    "content": "fake-key-bytes",
+                    "signed-by": KEY_CONTENT,
                 }
             ],
         }
@@ -30,6 +31,26 @@ def make_config() -> Configuration:
     return Configuration.model_validate(SOURCE_CONTENT)
 
 
+def make_config_with(source_extra: dict, name: str = "interdiode") -> Configuration:
+    data = {
+        "uuid": "12345678-1234-5678-1234-567812345678",
+        "organisation": "InterDiode",
+        "configurations": {
+            "apt": {
+                "sources": [
+                    {
+                        "name": name,
+                        "uris": ["http://example.invalid/debian"],
+                        "suites": ["stable"],
+                        **source_extra,
+                    }
+                ],
+            }
+        },
+    }
+    return Configuration.model_validate(data)
+
+
 def test_is_relevant_false_without_src(tmp_path) -> None:
     context = Context(config=make_config(), dst=tmp_path / "dst", src=None)
     assert AptModule().is_relevant(context) is False
@@ -49,7 +70,9 @@ def test_is_relevant_true_with_apt_dir(tmp_path) -> None:
     assert AptModule().is_relevant(context) is True
 
 
-def test_apply_disables_existing_sources_and_adds_configured_ones(tmp_path) -> None:
+def test_apply_copies_existing_sources_unchanged_without_uri_to_replace(
+    tmp_path,
+) -> None:
     src = tmp_path / "src"
     apt_dir = src / "etc/apt"
     sources_list_d = apt_dir / "sources.list.d"
@@ -76,37 +99,88 @@ def test_apply_disables_existing_sources_and_adds_configured_ones(tmp_path) -> N
 
     AptModule().apply(context)
 
-    disabled_top_level = (dst / "etc/apt/sources.list").read_text(encoding="utf-8")
+    # No configured source declares a uri_to_replace, so none of the existing
+    # entries are disabled: they are copied through unchanged.
+    top_level = (dst / "etc/apt/sources.list").read_text(encoding="utf-8")
     assert (
-        disabled_top_level
-        == "# already disabled\n# deb http://example.invalid/legacy stable main\n\n"
+        top_level
+        == "# already disabled\ndeb http://example.invalid/legacy stable main\n\n"
     )
 
-    disabled_list = (dst / "etc/apt/sources.list.d/extra.list").read_text(
-        encoding="utf-8"
-    )
-    assert disabled_list == "# deb http://example.invalid/extra stable main\n"
+    extra_list = (dst / "etc/apt/sources.list.d/extra.list").read_text(encoding="utf-8")
+    assert extra_list == "deb http://example.invalid/extra stable main\n"
 
-    disabled_sources = (dst / "etc/apt/sources.list.d/docker.sources").read_text(
+    docker_sources = (dst / "etc/apt/sources.list.d/docker.sources").read_text(
         encoding="utf-8"
     )
-    assert disabled_sources == (
-        "Types: deb\nURIs: http://example.invalid/docker\nSuites: stable\nEnabled: no"
+    assert docker_sources == (
+        "Types: deb\nURIs: http://example.invalid/docker\nSuites: stable\nEnabled: yes"
         "\n\n"
-        "Types: deb\nURIs: http://example.invalid/docker2\nSuites: stable\nEnabled: no\n"
+        "Types: deb\nURIs: http://example.invalid/docker2\nSuites: stable\n"
     )
 
     assert not (dst / "etc/apt/sources.list.d/ignored.txt").exists()
 
-    keyring = (dst / "etc/apt/keyrings/interdiode.asc").read_bytes()
-    assert keyring == b"fake-key-bytes"
-
     configured_source = (dst / "etc/apt/sources.list.d/interdiode.sources").read_text(
         encoding="utf-8"
     )
     assert configured_source == (
         "Types: deb\nURIs: http://example.invalid/debian\nSuites: stable\n"
-        "Signed-By: /etc/apt/keyrings/interdiode.asc\nEnabled: yes\n"
+        "Signed-By:\n"
+        " -----BEGIN PGP PUBLIC KEY BLOCK-----\n"
+        " .\n"
+        " mQENBGqh08IBCAC0\n"
+        " -----END PGP PUBLIC KEY BLOCK-----\n"
+        "Enabled: yes\n"
+    )
+
+
+def test_apply_disables_only_existing_sources_matching_uri_to_replace(
+    tmp_path,
+) -> None:
+    src = tmp_path / "src"
+    apt_dir = src / "etc/apt"
+    sources_list_d = apt_dir / "sources.list.d"
+    sources_list_d.mkdir(parents=True)
+
+    (apt_dir / "sources.list").write_text(
+        "deb http://example.invalid/legacy stable main\n", encoding="utf-8"
+    )
+    (sources_list_d / "extra.list").write_text(
+        "deb http://example.invalid/extra stable main\n", encoding="utf-8"
+    )
+    (sources_list_d / "docker.sources").write_text(
+        "Types: deb\nURIs: http://example.invalid/extra\nSuites: stable\nEnabled: yes\n"
+        "\n"
+        "Types: deb\nURIs: http://example.invalid/docker2\nSuites: stable\n"
+        "\n\n",
+        encoding="utf-8",
+    )
+
+    dst = tmp_path / "dst"
+    context = Context(
+        config=make_config_with({"uri-to-replace": "http://example.invalid/extra"}),
+        dst=dst,
+        src=src,
+    )
+
+    AptModule().apply(context)
+
+    # The legacy source doesn't match the pattern, so it stays enabled...
+    top_level = (dst / "etc/apt/sources.list").read_text(encoding="utf-8")
+    assert top_level == "deb http://example.invalid/legacy stable main\n"
+
+    # ...but every entry whose URI matches is disabled, regardless of format.
+    extra_list = (dst / "etc/apt/sources.list.d/extra.list").read_text(encoding="utf-8")
+    assert extra_list == "# deb http://example.invalid/extra stable main\n"
+
+    docker_sources = (dst / "etc/apt/sources.list.d/docker.sources").read_text(
+        encoding="utf-8"
+    )
+    assert docker_sources == (
+        "Types: deb\nURIs: http://example.invalid/extra\nSuites: stable\nEnabled: no"
+        "\n\n"
+        "Types: deb\nURIs: http://example.invalid/docker2\nSuites: stable\n"
     )
 
 
@@ -120,3 +194,173 @@ def test_apply_without_existing_top_level_sources_list(tmp_path) -> None:
 
     assert not (dst / "etc/apt/sources.list").exists()
     assert (dst / "etc/apt/sources.list.d/interdiode.sources").exists()
+
+
+def test_apply_uses_signed_by_file_when_no_key_content(tmp_path) -> None:
+    dst = tmp_path / "dst"
+    context = Context(
+        config=make_config_with({"signed-by-file": "/etc/apt/keyrings/existing.gpg"}),
+        dst=dst,
+        src=None,
+    )
+
+    AptModule().apply(context)
+
+    configured_source = (dst / "etc/apt/sources.list.d/interdiode.sources").read_text(
+        encoding="utf-8"
+    )
+    assert configured_source == (
+        "Types: deb\nURIs: http://example.invalid/debian\nSuites: stable\n"
+        "Signed-By: /etc/apt/keyrings/existing.gpg\nEnabled: yes\n"
+    )
+
+
+def test_apply_signed_by_takes_precedence_over_signed_by_file(tmp_path) -> None:
+    dst = tmp_path / "dst"
+    context = Context(
+        config=make_config_with(
+            {
+                "signed-by": KEY_CONTENT,
+                "signed-by-file": "/etc/apt/keyrings/existing.gpg",
+            }
+        ),
+        dst=dst,
+        src=None,
+    )
+
+    AptModule().apply(context)
+
+    configured_source = (dst / "etc/apt/sources.list.d/interdiode.sources").read_text(
+        encoding="utf-8"
+    )
+    assert "Signed-By:\n -----BEGIN PGP PUBLIC KEY BLOCK-----" in configured_source
+    assert "existing.gpg" not in configured_source
+
+
+def test_apply_without_signed_by_writes_no_field(tmp_path) -> None:
+    dst = tmp_path / "dst"
+    context = Context(config=make_config_with({}), dst=dst, src=None)
+
+    AptModule().apply(context)
+
+    configured_source = (dst / "etc/apt/sources.list.d/interdiode.sources").read_text(
+        encoding="utf-8"
+    )
+    assert configured_source == (
+        "Types: deb\nURIs: http://example.invalid/debian\nSuites: stable\nEnabled: yes\n"
+    )
+
+
+def test_apply_skips_source_when_uri_to_replace_matches_nothing(tmp_path) -> None:
+    src = tmp_path / "src"
+    apt_dir = src / "etc/apt"
+    apt_dir.mkdir(parents=True)
+    (apt_dir / "sources.list").write_text(
+        "deb http://example.invalid/legacy stable main\n", encoding="utf-8"
+    )
+
+    dst = tmp_path / "dst"
+    context = Context(
+        config=make_config_with({"uri-to-replace": "http://other.invalid/*"}),
+        dst=dst,
+        src=src,
+    )
+
+    AptModule().apply(context)
+
+    assert not (dst / "etc/apt/sources.list.d/interdiode.sources").exists()
+
+
+def test_apply_writes_source_when_uri_to_replace_matches_existing_uri(
+    tmp_path,
+) -> None:
+    src = tmp_path / "src"
+    apt_dir = src / "etc/apt"
+    apt_dir.mkdir(parents=True)
+    (apt_dir / "sources.list").write_text(
+        "deb http://legacy.invalid/debian stable main\n", encoding="utf-8"
+    )
+
+    dst = tmp_path / "dst"
+    context = Context(
+        config=make_config_with({"uri-to-replace": "http://legacy.invalid/*"}),
+        dst=dst,
+        src=src,
+    )
+
+    AptModule().apply(context)
+
+    assert (dst / "etc/apt/sources.list.d/interdiode.sources").exists()
+
+
+def test_apply_skips_source_when_uri_to_replace_set_without_src(tmp_path) -> None:
+    dst = tmp_path / "dst"
+    context = Context(
+        config=make_config_with({"uri-to-replace": "http://*"}), dst=dst, src=None
+    )
+
+    AptModule().apply(context)
+
+    assert not (dst / "etc/apt/sources.list.d/interdiode.sources").exists()
+
+
+def test_apply_matches_uri_to_replace_across_list_line_variants(tmp_path) -> None:
+    src = tmp_path / "src"
+    apt_dir = src / "etc/apt"
+    sources_list_d = apt_dir / "sources.list.d"
+    sources_list_d.mkdir(parents=True)
+
+    (apt_dir / "sources.list").write_text(
+        "# a comment\n"
+        "\n"
+        "garbage line here\n"
+        "deb [unterminated bracket with no closing marker\n"
+        "deb [arch=amd64 trusted=yes] http://example.invalid/extra stable main\n",
+        encoding="utf-8",
+    )
+    (sources_list_d / "ignored.txt").write_text("not a source file\n", encoding="utf-8")
+
+    data = {
+        "uuid": "12345678-1234-5678-1234-567812345678",
+        "organisation": "InterDiode",
+        "configurations": {
+            "apt": {
+                "sources": [
+                    {
+                        "name": "first",
+                        "uris": ["http://example.invalid/first"],
+                        "suites": ["stable"],
+                        "uri-to-replace": "http://example.invalid/extra",
+                    },
+                    {
+                        "name": "second",
+                        "uris": ["http://example.invalid/second"],
+                        "suites": ["stable"],
+                        "uri-to-replace": "http://example.invalid/extra",
+                    },
+                ],
+            }
+        },
+    }
+    dst = tmp_path / "dst"
+    context = Context(config=Configuration.model_validate(data), dst=dst, src=src)
+
+    AptModule().apply(context)
+
+    assert (dst / "etc/apt/sources.list.d/first.sources").exists()
+    assert (dst / "etc/apt/sources.list.d/second.sources").exists()
+
+
+def test_apply_sanitizes_source_name_with_slash(tmp_path) -> None:
+    dst = tmp_path / "dst"
+    context = Context(
+        config=make_config_with({"signed-by": KEY_CONTENT}, name="../../evil"),
+        dst=dst,
+        src=None,
+    )
+
+    AptModule().apply(context)
+
+    source_file = dst / "etc/apt/sources.list.d/.._.._evil.sources"
+    assert source_file.exists()
+    assert not (dst / "etc/apt/sources.list.d/evil.sources").exists()

tests/test_certificates.py

@@ -54,6 +54,27 @@ def test_apply_writes_certificate_and_rebuilds_bundle(tmp_path) -> None:
     assert openssl_default.readlink().as_posix() == "/etc/ssl/certs/ca-certificates.crt"
 
 
+def test_apply_sanitizes_certificate_name_with_slash(tmp_path) -> None:
+    data = {
+        "uuid": "12345678-1234-5678-1234-567812345678",
+        "organisation": "InterDiode",
+        "configurations": {
+            "certificates": [{"name": "../../evil", "content": CERT_CONTENT}]
+        },
+    }
+    dst = tmp_path / "dst"
+    context = Context(config=Configuration.model_validate(data), dst=dst, src=None)
+
+    CertificatesModule().apply(context)
+
+    local_cert = dst / "usr/local/share/ca-certificates/.._.._evil.crt"
+    assert local_cert.read_bytes() == b"fake-cert-bytes"
+    # The "/" must never be interpreted as a path separator: without
+    # sanitizing, "../../evil" would have reshuffled the write up to
+    # usr/local/evil.crt instead of staying under ca-certificates/.
+    assert not (dst / "usr/local/evil.crt").exists()
+
+
 def test_apply_merges_conf_listed_and_local_certificates(tmp_path) -> None:
     src = tmp_path / "src"
     local_certs_dir = src / "usr/local/share/ca-certificates"

tests/test_config.py

@@ -34,7 +34,6 @@ FULL_CONFIG = {
                     "signed-by": "/etc/apt/keyrings/interdiode.asc",
                 }
             ],
-            "keys": [{"name": "interdiode", "content": "ZmFrZQ=="}],
         },
         "yum": {
             "repositories": [
@@ -76,7 +75,6 @@ def test_parse_configuration_from_json() -> None:
         configuration.configurations.apt.sources[0].signed_by
         == "/etc/apt/keyrings/interdiode.asc"
     )
-    assert configuration.configurations.apt.keys[0].name == "interdiode"
     assert configuration.configurations.yum.keys[0].name == "interdiode"
 
 
@@ -191,7 +189,6 @@ def test_apt_source_to_deb822_full() -> None:
         enabled=False,
         trusted=True,
         **{
-            "signed-by": "/etc/apt/keyrings/interdiode.asc",
             "by-hash": True,
             "allow-insecure": False,
             "allow-weak": False,
@@ -205,7 +202,7 @@ def test_apt_source_to_deb822_full() -> None:
         pdiffs=True,
         description="InterDiode APT repository",
     )
-    rendered = source.to_deb822()
+    rendered = source.to_deb822(signed_by_path="/etc/apt/keyrings/interdiode.asc")
     assert rendered.splitlines() == [
         "Types: deb deb-src",
         "URIs: http://example.invalid/debian",
@@ -229,3 +226,39 @@ def test_apt_source_to_deb822_full() -> None:
         "Description: InterDiode APT repository",
         "Enabled: no",
     ]
+
+
+def test_apt_source_to_deb822_folds_inline_signed_by_key() -> None:
+    source = AptSource(
+        name="interdiode", uris=["http://example.invalid/debian"], suites=["stable"]
+    )
+    armored_key = (
+        "-----BEGIN PGP PUBLIC KEY BLOCK-----\n"
+        "\n"
+        "mQENBGqh08IBCAC0\n"
+        "-----END PGP PUBLIC KEY BLOCK-----\n"
+    )
+    rendered = source.to_deb822(signed_by_armored_key=armored_key)
+    assert rendered == (
+        "Types: deb\n"
+        "URIs: http://example.invalid/debian\n"
+        "Suites: stable\n"
+        "Signed-By:\n"
+        " -----BEGIN PGP PUBLIC KEY BLOCK-----\n"
+        " .\n"
+        " mQENBGqh08IBCAC0\n"
+        " -----END PGP PUBLIC KEY BLOCK-----\n"
+        "Enabled: yes\n"
+    )
+
+
+def test_apt_source_to_deb822_signed_by_armored_key_takes_precedence() -> None:
+    source = AptSource(
+        name="interdiode", uris=["http://example.invalid/debian"], suites=["stable"]
+    )
+    rendered = source.to_deb822(
+        signed_by_armored_key="-----BEGIN PGP PUBLIC KEY BLOCK-----\nabc\n-----END PGP PUBLIC KEY BLOCK-----\n",
+        signed_by_path="/etc/apt/keyrings/unused.gpg",
+    )
+    assert "Signed-By:\n" in rendered
+    assert "unused.gpg" not in rendered

tests/test_modules_base.py

@@ -1,5 +1,10 @@
 from id_configurator.modules import base as base_module
-from id_configurator.modules.base import Module, all_modules, register
+from id_configurator.modules.base import (
+    Module,
+    all_modules,
+    register,
+    sanitize_filename,
+)
 
 
 def test_register_and_all_modules_are_isolated(monkeypatch) -> None:
@@ -17,3 +22,15 @@ def test_register_and_all_modules_are_isolated(monkeypatch) -> None:
     register(DummyModule)
 
     assert all_modules() == [DummyModule]
+
+
+def test_sanitize_filename_leaves_plain_names_untouched() -> None:
+    assert sanitize_filename("interdiode") == "interdiode"
+
+
+def test_sanitize_filename_replaces_forward_slash() -> None:
+    assert sanitize_filename("../../etc/passwd") == ".._.._etc_passwd"
+
+
+def test_sanitize_filename_replaces_backslash() -> None:
+    assert sanitize_filename(r"a\b") == "a_b"

tests/test_npm.py

@@ -28,6 +28,14 @@ EMPTY_CONFIG = {
     "organisation": "InterDiode",
 }
 
+CONFIG_WITH_CERTIFICATE_ONLY = {
+    "uuid": "12345678-1234-5678-1234-567812345678",
+    "organisation": "InterDiode",
+    "configurations": {
+        "certificates": [{"name": "interdiode-ca", "content": "-----BEGIN...-----"}]
+    },
+}
+
 
 def make_config(data: dict) -> Configuration:
     return Configuration.model_validate(data)
@@ -38,6 +46,13 @@ def test_is_relevant_false_when_no_repositories(tmp_path) -> None:
     assert NpmModule().is_relevant(context) is False
 
 
+def test_is_relevant_true_with_certificate_only(tmp_path) -> None:
+    context = Context(
+        config=make_config(CONFIG_WITH_CERTIFICATE_ONLY), dst=tmp_path / "dst", src=None
+    )
+    assert NpmModule().is_relevant(context) is True
+
+
 def test_is_relevant_true_with_repository(tmp_path) -> None:
     context = Context(
         config=make_config(CONFIG_WITH_REPO), dst=tmp_path / "dst", src=None
@@ -69,3 +84,50 @@ def test_apply_writes_additional_repositories_scoped(tmp_path) -> None:
         "registry=https://example.invalid/\n"
         "@myorg:registry=https://other.invalid/\n"
     )
+
+
+def test_apply_without_certificates_does_not_write_etc_environment(tmp_path) -> None:
+    dst = tmp_path / "dst"
+    context = Context(config=make_config(CONFIG_WITH_REPO), dst=dst, src=None)
+
+    NpmModule().apply(context)
+
+    assert not (dst / "etc/environment").exists()
+
+
+def test_apply_sets_node_extra_ca_certs_when_certificates_configured(
+    tmp_path,
+) -> None:
+    dst = tmp_path / "dst"
+    context = Context(
+        config=make_config(CONFIG_WITH_CERTIFICATE_ONLY), dst=dst, src=None
+    )
+
+    NpmModule().apply(context)
+
+    assert not (dst / "usr/local/etc/npmrc").exists()
+    environment = (dst / "etc/environment").read_text(encoding="utf-8")
+    assert environment == "NODE_EXTRA_CA_CERTS=/etc/ssl/certs/ca-certificates.crt\n"
+
+
+def test_apply_merges_node_extra_ca_certs_into_existing_etc_environment(
+    tmp_path,
+) -> None:
+    src = tmp_path / "src"
+    src.mkdir()
+    (src / "etc").mkdir()
+    (src / "etc/environment").write_text(
+        "PATH=/usr/bin\nNODE_EXTRA_CA_CERTS=/old/stale.pem\n", encoding="utf-8"
+    )
+
+    dst = tmp_path / "dst"
+    context = Context(
+        config=make_config(CONFIG_WITH_CERTIFICATE_ONLY), dst=dst, src=src
+    )
+
+    NpmModule().apply(context)
+
+    environment = (dst / "etc/environment").read_text(encoding="utf-8")
+    assert environment == (
+        "PATH=/usr/bin\nNODE_EXTRA_CA_CERTS=/etc/ssl/certs/ca-certificates.crt\n"
+    )

tests/test_php.py

@@ -34,6 +34,14 @@ EMPTY_CONFIG = {
     "organisation": "InterDiode",
 }
 
+CONFIG_WITH_CERTIFICATE_ONLY = {
+    "uuid": "12345678-1234-5678-1234-567812345678",
+    "organisation": "InterDiode",
+    "configurations": {
+        "certificates": [{"name": "interdiode-ca", "content": "-----BEGIN...-----"}]
+    },
+}
+
 
 def make_config(data: dict) -> Configuration:
     return Configuration.model_validate(data)
@@ -44,6 +52,13 @@ def test_is_relevant_false_when_no_repositories(tmp_path) -> None:
     assert PhpModule().is_relevant(context) is False
 
 
+def test_is_relevant_true_with_certificate_only(tmp_path) -> None:
+    context = Context(
+        config=make_config(CONFIG_WITH_CERTIFICATE_ONLY), dst=tmp_path / "dst", src=None
+    )
+    assert PhpModule().is_relevant(context) is True
+
+
 def test_is_relevant_true_with_repository(tmp_path) -> None:
     context = Context(
         config=make_config(CONFIG_WITH_REPO), dst=tmp_path / "dst", src=None
@@ -79,3 +94,27 @@ def test_apply_writes_multiple_repositories_in_order(tmp_path) -> None:
     config_path = dst / "root/.composer/config.json"
     content = json.loads(config_path.read_text(encoding="utf-8"))
     assert [repo["name"] for repo in content["repositories"]] == ["demo", "other"]
+
+
+def test_apply_without_certificates_does_not_write_openssl_ini(tmp_path) -> None:
+    dst = tmp_path / "dst"
+    context = Context(config=make_config(CONFIG_WITH_REPO), dst=dst, src=None)
+
+    PhpModule().apply(context)
+
+    assert not (dst / "usr/local/etc/php/conf.d/id-configurator-openssl.ini").exists()
+
+
+def test_apply_sets_openssl_cafile_when_certificates_configured(tmp_path) -> None:
+    dst = tmp_path / "dst"
+    context = Context(
+        config=make_config(CONFIG_WITH_CERTIFICATE_ONLY), dst=dst, src=None
+    )
+
+    PhpModule().apply(context)
+
+    assert not (dst / "root/.composer/config.json").exists()
+    ini_content = (
+        dst / "usr/local/etc/php/conf.d/id-configurator-openssl.ini"
+    ).read_text(encoding="utf-8")
+    assert ini_content == "openssl.cafile=/etc/ssl/certs/ca-certificates.crt\n"

tests/test_yum.py

@@ -126,7 +126,9 @@ def test_apply_unsigned_repo_disables_gpgcheck(tmp_path) -> None:
     )
 
 
-def test_apply_disables_existing_repos_before_adding_configured_ones(tmp_path) -> None:
+def test_apply_copies_existing_repos_unchanged_without_index_url_to_replace(
+    tmp_path,
+) -> None:
     src = tmp_path / "src"
     repos_dir = src / "etc/yum.repos.d"
     repos_dir.mkdir(parents=True)
@@ -148,13 +150,13 @@ def test_apply_disables_existing_repos_before_adding_configured_ones(tmp_path) -
 
     YumModule().apply(context)
 
-    disabled_multi = (dst / "etc/yum.repos.d/multi.repo").read_text(encoding="utf-8")
-    assert "[old-one]" in disabled_multi
-    assert "[old-two]" in disabled_multi
+    # No configured repository declares an index_url_to_replace, so the
+    # existing sections are copied through unchanged, still enabled.
+    copied_multi = (dst / "etc/yum.repos.d/multi.repo").read_text(encoding="utf-8")
     parser = ConfigParser(interpolation=None)
-    parser.read_string(disabled_multi)
-    assert parser["old-one"]["enabled"] == "0"
-    assert parser["old-two"]["enabled"] == "0"
+    parser.read_string(copied_multi)
+    assert parser["old-one"]["enabled"] == "1"
+    assert parser["old-two"]["enabled"] == "1"
 
     assert not (dst / "etc/yum.repos.d/ignored.txt").exists()
 
@@ -165,6 +167,182 @@ def test_apply_disables_existing_repos_before_adding_configured_ones(tmp_path) -
     )
 
 
+def test_apply_disables_only_existing_sections_matching_index_url_to_replace(
+    tmp_path,
+) -> None:
+    src = tmp_path / "src"
+    repos_dir = src / "etc/yum.repos.d"
+    repos_dir.mkdir(parents=True)
+    (repos_dir / "multi.repo").write_text(
+        "[old-one]\nname=old-one\nbaseurl=https://old-one.invalid\nenabled=1\ngpgcheck=1\n"
+        "\n"
+        "[old-two]\nname=old-two\nbaseurl=https://old-two.invalid\nenabled=1\n",
+        encoding="utf-8",
+    )
+
+    data = {
+        "uuid": "12345678-1234-5678-1234-567812345678",
+        "organisation": "InterDiode",
+        "configurations": {
+            "yum": {
+                "repositories": [
+                    {
+                        "name": "unsigned",
+                        "index-url": "https://example.invalid/yum",
+                        "index-url-to-replace": "https://old-one.invalid",
+                    }
+                ]
+            }
+        },
+    }
+    dst = tmp_path / "dst"
+    context = Context(config=make_config(data), dst=dst, src=src)
+
+    YumModule().apply(context)
+
+    disabled_multi = (dst / "etc/yum.repos.d/multi.repo").read_text(encoding="utf-8")
+    parser = ConfigParser(interpolation=None)
+    parser.read_string(disabled_multi)
+    assert parser["old-one"]["enabled"] == "0"
+    assert parser["old-two"]["enabled"] == "1"
+
+
+def test_apply_skips_repository_when_index_url_to_replace_matches_nothing(
+    tmp_path,
+) -> None:
+    src = tmp_path / "src"
+    repos_dir = src / "etc/yum.repos.d"
+    repos_dir.mkdir(parents=True)
+    (repos_dir / "old.repo").write_text(
+        "[old]\nname=old\nbaseurl=https://old.invalid\nenabled=1\n", encoding="utf-8"
+    )
+    data = {
+        "uuid": "12345678-1234-5678-1234-567812345678",
+        "organisation": "InterDiode",
+        "configurations": {
+            "yum": {
+                "repositories": [
+                    {
+                        "name": "unsigned",
+                        "index-url": "https://example.invalid/yum",
+                        "index-url-to-replace": "https://other.invalid/*",
+                    }
+                ]
+            }
+        },
+    }
+    dst = tmp_path / "dst"
+    context = Context(config=make_config(data), dst=dst, src=src)
+
+    YumModule().apply(context)
+
+    assert not (dst / "etc/yum.repos.d/unsigned.repo").exists()
+
+
+def test_apply_writes_repository_when_index_url_to_replace_matches_existing(
+    tmp_path,
+) -> None:
+    src = tmp_path / "src"
+    repos_dir = src / "etc/yum.repos.d"
+    repos_dir.mkdir(parents=True)
+    (repos_dir / "old.repo").write_text(
+        "[old]\nname=old\nbaseurl=https://old.invalid/yum\nenabled=1\n",
+        encoding="utf-8",
+    )
+    data = {
+        "uuid": "12345678-1234-5678-1234-567812345678",
+        "organisation": "InterDiode",
+        "configurations": {
+            "yum": {
+                "repositories": [
+                    {
+                        "name": "unsigned",
+                        "index-url": "https://example.invalid/yum",
+                        "index-url-to-replace": "https://old.invalid/*",
+                    }
+                ]
+            }
+        },
+    }
+    dst = tmp_path / "dst"
+    context = Context(config=make_config(data), dst=dst, src=src)
+
+    YumModule().apply(context)
+
+    assert (dst / "etc/yum.repos.d/unsigned.repo").exists()
+
+
+def test_apply_matches_index_url_to_replace_with_unrelated_files_and_multiple_repos(
+    tmp_path,
+) -> None:
+    src = tmp_path / "src"
+    repos_dir = src / "etc/yum.repos.d"
+    repos_dir.mkdir(parents=True)
+    (repos_dir / "old.repo").write_text(
+        "[old]\nname=old\nbaseurl=https://old.invalid/yum\nenabled=1\n",
+        encoding="utf-8",
+    )
+    (repos_dir / "ignored.txt").write_text("not a repo file\n", encoding="utf-8")
+
+    data = {
+        "uuid": "12345678-1234-5678-1234-567812345678",
+        "organisation": "InterDiode",
+        "configurations": {
+            "yum": {
+                "repositories": [
+                    {
+                        "name": "first",
+                        "index-url": "https://example.invalid/first",
+                        "index-url-to-replace": "https://old.invalid/*",
+                    },
+                    {
+                        "name": "second",
+                        "index-url": "https://example.invalid/second",
+                        "index-url-to-replace": "https://old.invalid/*",
+                    },
+                ]
+            }
+        },
+    }
+    dst = tmp_path / "dst"
+    context = Context(config=make_config(data), dst=dst, src=src)
+
+    YumModule().apply(context)
+
+    assert (dst / "etc/yum.repos.d/first.repo").exists()
+    assert (dst / "etc/yum.repos.d/second.repo").exists()
+
+
+def test_apply_sanitizes_repository_and_key_names_with_slash(
+    tmp_path, monkeypatch
+) -> None:
+    mock_run = _mock_gpg_success(monkeypatch)
+    data = {
+        "uuid": "12345678-1234-5678-1234-567812345678",
+        "organisation": "InterDiode",
+        "configurations": {
+            "yum": {
+                "repositories": [
+                    {
+                        "name": "../../evil-repo",
+                        "index-url": "https://example.invalid/yum",
+                    }
+                ],
+                "keys": [{"name": "../../evil-key", "content": KEY_CONTENT}],
+            }
+        },
+    }
+    dst = tmp_path / "dst"
+    context = Context(config=make_config(data), dst=dst, src=None)
+
+    YumModule().apply(context)
+
+    assert (dst / "etc/yum.repos.d/.._.._evil-repo.repo").exists()
+    key_content = (dst / "etc/pki/rpm-gpg/RPM-GPG-KEY-.._.._evil-key").read_bytes()
+    assert key_content == b"fake-rpm-gpg-key-bytes"
+    mock_run.assert_called_once()
+
+
 def test_import_key_raises_when_gpg_binary_missing(tmp_path, monkeypatch) -> None:
     monkeypatch.setattr(
         "id_configurator.modules.yum.subprocess.run",

uv.lock

@@ -22,11 +22,11 @@ wheels = [
 
 [[package]]
 name = "cachetools"
-sdist = {url = "https://files.pythonhosted.org/packages/70/d2/47e8bc06fe2a06d3f5bdf20f1126ab66c4e99dc48d940e7ba873f7ac7131/cachetools-7.1.7.tar.gz", hash = "sha256:a3e2a00b14d8f8a6b70c1dae7b4685e7ad3bc965c5b42124a2d6ce895da6cf50", size = 40680, upload-time = "2026-08-01T21:20:40.434Z"}
+sdist = {url = "https://files.pythonhosted.org/packages/4b/39/9a4689914dd907915cee74733b95888fc1d8a21aad47a24a0a2deec73ac4/cachetools-7.1.8.tar.gz", hash = "sha256:1221d547a0b24b7f26fa891d40d488b5258beab9aebd8ed68c729be3af849c43", size = 40909, upload-time = "2026-08-31T19:02:53.985Z"}
 source = {registry = "https://pypi.org/simple"}
-version = "7.1.7"
+version = "7.1.8"
 wheels = [
-  {url = "https://files.pythonhosted.org/packages/e4/d8/767faeda872075724b95dd675466a645f1b92aadcdcf2d1429dcfd76c176/cachetools-7.1.7-py3-none-any.whl", hash = "sha256:ef98ef375ad188819ef2f9b3645e3987f4b8c5b7550e436ad998c2de78296df0", size = 16830, upload-time = "2026-08-01T21:20:38.977Z"}
+  {url = "https://files.pythonhosted.org/packages/d7/3d/9487690d0e937854db587205c66bab3c3cf88d9f00ed380b74cb88cc94ee/cachetools-7.1.8-py3-none-any.whl", hash = "sha256:a81e3844acaa7355b6567f97bd67a94a14ec3a9bc2cbbdae45b9592cc036775b", size = 16842, upload-time = "2026-08-31T19:02:52.554Z"}
 ]
 
 [[package]]
@@ -237,86 +237,86 @@ wheels = [
 
 [[package]]
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